Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system ibs family toxin | D3821_02725 | Not Available | Positive | 578759 - 578818 | 2232.03 |
| vwa domain-containing protein | D3821_02730 | Not Available | Positive | 579039 - 579698 | 24204.0 |
| protein phosphatase 2c domain-containing protein | D3821_02735 | Not Available | Positive | 579695 - 580456 | 27343.7 |
| duf2314 domain-containing protein | D3821_02740 | Not Available | Negative | 580521 - 580982 | 17428.8 |
| helix-hairpin-helix domain-containing protein | D3821_02745 | Not Available | Positive | 581182 - 583128 | 71616.7 |
| molecular chaperone | D3821_02750 | Not Available | Negative | 583140 - 584492 | 49303.0 |
| heat-shock protein | D3821_02755 | Not Available | Negative | 584417 - 584572 | 5697.13 |
| 3-methyladenine dna glycosylase 2 | D3821_02760 | Not Available | Positive | 584626 - 585474 | 31395.0 |
| sensor domain-containing diguanylate cyclase | D3821_02765 | Not Available | Negative | 585583 - 588900 | 123908.0 |
| uridine kinase | D3821_02770 | Not Available | Positive | 589218 - 589859 | 24354.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




