Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tagatose-bisphosphate aldolase subunit gatz | D3821_02625 | Not Available | Positive | 556980 - 558242 | 46993.2 |
| pts galactitol transporter subunit iia | D3821_02630 | Not Available | Positive | 558252 - 558704 | 17038.5 |
| pts galactitol transporter subunit iib | D3821_02635 | Not Available | Positive | 558735 - 559019 | 10208.7 |
| pts galactitol transporter subunit iic | D3821_02640 | Not Available | Positive | 559023 - 560378 | 48322.0 |
| galactitol-1-phosphate 5-dehydrogenase | D3821_02645 | Not Available | Positive | 560426 - 561466 | 37392.3 |
| deor/glpr transcriptional regulator | D3821_02650 | Not Available | Positive | 561566 - 562345 | 27960.9 |
| lipid kinase yegs | D3821_02655 | Not Available | Negative | 562427 - 563326 | 31989.6 |
| hypothetical protein | D3821_02660 | Not Available | Positive | 563732 - 564049 | 11375.8 |
| hypothetical protein | D3821_02665 | Not Available | Positive | 564037 - 564186 | 5711.07 |
| protease | D3821_02670 | Not Available | Negative | 564379 - 565740 | 51196.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




