Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | D3821_02575 | Not Available | Positive | 547506 - 547778 | 10134.5 |
| hydroxyethylthiazole kinase | D3821_02580 | Not Available | Positive | 548001 - 548789 | 27316.7 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | D3821_02585 | Not Available | Positive | 548786 - 549586 | 28635.2 |
| glycoside hydrolase family 25 protein | D3821_02590 | Not Available | Positive | 549651 - 550469 | 31600.8 |
| transcriptional regulator | D3821_02595 | Not Available | Positive | 550521 - 551267 | 28278.8 |
| sugar kinase | D3821_02600 | Not Available | Negative | 551241 - 552206 | 34379.4 |
| adp-ribosylglycohydrolase family protein | D3821_02605 | Not Available | Negative | 552203 - 553207 | 35622.5 |
| mfs transporter | D3821_02610 | Not Available | Negative | 553204 - 554481 | 47361.8 |
| fructose-bisphosphate aldolase | D3821_02615 | Not Available | Positive | 554738 - 555790 | 38111.4 |
| tagatose-1,6-bisphosphate aldolase | D3821_02620 | Not Available | Positive | 556097 - 556951 | 30847.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




