Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Signal recognition particle protein | D3821_16780 | Not Available | Positive | 3397262 - 3398623 | 49790.5 |
| 30s ribosomal protein s16 | D3821_16785 | Not Available | Positive | 3398872 - 3399120 | 9191.08 |
| ribosome maturation factor rimm | D3821_16790 | Not Available | Positive | 3399139 - 3399687 | 20548.5 |
| trna (guanosine(37)-n1)-methyltransferase trmd | D3821_16795 | Not Available | Positive | 3399718 - 3400485 | 28424.0 |
| 50s ribosomal protein l19 | D3821_16800 | Not Available | Positive | 3400527 - 3400874 | 13134.0 |
| Pag | D3821_16805 | Not Available | Negative | 3401019 - 3401237 | 8359.05 |
| Tail protein | D3821_16810 | Not Available | Negative | 3401313 - 3402482 | 42783.9 |
| Tail protein | D3821_16815 | Not Available | Negative | 3402479 - 3402964 | 17711.3 |
| Tail length determinator | D3821_16820 | Not Available | Negative | 3402978 - 3405421 | 88517.8 |
| Tail protein | D3821_16825 | Not Available | Negative | 3405414 - 3405533 | 4593.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




