Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4132 domain-containing protein | D3821_02525 | Not Available | Negative | 532998 - 536798 | 142890.0 |
| methionine--trna ligase | D3821_02530 | Not Available | Negative | 536939 - 538972 | 76309.0 |
| protein mrp | D3821_02535 | Not Available | Positive | 539104 - 540213 | 39940.4 |
| duf2574 family protein | D3821_02540 | Not Available | Positive | 540476 - 540757 | 10286.3 |
| type 1 fimbrial protein | D3821_02545 | Not Available | Positive | 541057 - 541599 | 18833.5 |
| hypothetical protein | D3821_02550 | Not Available | Positive | 541687 - 542361 | 24956.6 |
| fimbrial biogenesis outer membrane usher protein | D3821_02555 | Not Available | Positive | 542377 - 544857 | 92470.3 |
| putative fimbrial-like adhesin protein | D3821_02560 | Not Available | Positive | 544873 - 545907 | 36902.9 |
| nickel/cobalt homeostasis protein rcnb | D3821_02565 | Not Available | Negative | 545989 - 546327 | 12466.8 |
| nickel/cobalt efflux protein rcna | D3821_02570 | Not Available | Negative | 546549 - 547385 | 31013.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




