Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | D3821_02465 | Not Available | Positive | 514695 - 516380 | 62096.3 |
| dna-binding response regulator | D3821_02470 | Not Available | Positive | 516377 - 517096 | 27401.4 |
| duf1456 family protein | D3821_02475 | Not Available | Positive | 517143 - 517613 | 18003.9 |
| duf1307 domain-containing protein | D3821_02480 | Not Available | Negative | 517654 - 518115 | 16595.0 |
| hypothetical protein | D3821_02485 | Not Available | Negative | 518240 - 520243 | 73714.4 |
| vwa domain-containing protein | D3821_02490 | Not Available | Negative | 520240 - 521376 | 42245.8 |
| hypothetical protein | D3821_02495 | Not Available | Negative | 521369 - 523648 | 83559.9 |
| moxr family atpase | D3821_02500 | Not Available | Negative | 523659 - 524747 | 39656.6 |
| hypothetical protein | D3821_02505 | Not Available | Negative | 525931 - 526251 | 12711.2 |
| duf4132 domain-containing protein | D3821_02510 | Not Available | Negative | 526312 - 529944 | 137714.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




