Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator yeil | D3821_02255 | Not Available | Negative | 473283 - 473981 | 26888.7 |
| pyrimidine-specific ribonucleoside hydrolase rihb | D3821_02260 | Not Available | Positive | 474111 - 475052 | 33750.1 |
| nucleoside permease nupx | D3821_02265 | Not Available | Positive | 475152 - 476402 | 43412.3 |
| sugar kinase | D3821_02270 | Not Available | Negative | 476509 - 477597 | 39712.6 |
| endonuclease iv with intrinsic 3''-5'' exonuclease activity | D3821_02275 | Not Available | Negative | 477600 - 478457 | 31481.2 |
| yeih family protein | D3821_02280 | Not Available | Negative | 478531 - 479580 | 36884.3 |
| lysr family transcriptional regulator | D3821_02285 | Not Available | Positive | 479679 - 480560 | 32725.7 |
| lysine-specific permease | D3821_02290 | Not Available | Positive | 480765 - 482234 | 53579.0 |
| colicin i receptor | D3821_02300 | Not Available | Positive | 482528 - 484519 | 73899.5 |
| s-formylglutathione hydrolase yeig | D3821_02305 | Not Available | Negative | 484551 - 485387 | 31260.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




