Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Type ii toxin-antitoxin system toxin rata | D3821_16735 | Not Available | Positive | 3390293 - 3390769 | 17727.7 |
| Rnfh family protein | D3821_16740 | Not Available | Positive | 3390759 - 3391049 | 10790.0 |
| Outer membrane protein assembly factor bame | D3821_16745 | Not Available | Negative | 3391111 - 3391452 | 12302.8 |
| Dna repair protein recn | D3821_16750 | Not Available | Negative | 3391601 - 3393262 | 61400.1 |
| Dna repair protein recn | D3821_16755 | Not Available | Negative | 3393348 - 3394226 | 32568.3 |
| Attl | Not Available | Not Available | Positive | 3394065 - 3394076 | Not Available |
| molecular chaperone grpe | D3821_16760 | Not Available | Positive | 3394158 - 3394352 | 7103.64 |
| Heat shock protein | D3821_16765 | Not Available | Positive | 3394349 - 3394942 | 21813.1 |
| Hlyc/corc family transporter | D3821_16770 | Not Available | Negative | 3394997 - 3396238 | 46353.9 |
| Inner membrane protein ypjd | D3821_16775 | Not Available | Negative | 3396304 - 3397095 | 29263.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




