Guyparkeria sp. SCN-R1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Thioalkalibacteraceae

Genus

Guyparkeria

Description

Guyparkeria sp. SCN-R1 is a bacterial strain characterized by a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability and stability in various environments. The strain is cataloged under the accession number QZMT00000000.1, which allows for its identification and retrieval from genomic databases. The presence of only one replicon suggests that Guyparkeria sp. SCN-R1 may possess specific advantages in terms of replication efficiency and resource allocation. This trait could enable the organism to thrive in competitive microbial communities by efficiently managing its genetic material and metabolic processes. Ecologically, the characteristics of Guyparkeria sp. SCN-R1 may position it as a significant player in its native habitat, potentially influencing microbial dynamics and nutrient cycling. Its single replicon might facilitate rapid adaptation to environmental changes, contributing to its survival and ecological interactions. Further studies could elucidate its role in specific ecosystems and its interactions with other microbial species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyThioalkalibacteraceae
GenusGuyparkeria
SpeciesGuyparkeria sp. SCN-R1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Guyparkeria sp. SCN-R1 contig_00073, whole genome shotgun

Gene Summary

Adenine Count

423633 bp

Thymine Count

430013 bp

Guanine Count

793660 bp

Cytosine Count

770766 bp

Genome Length

2418072 bp

Protein-coding Genes

2163 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l28D5687_00045Not AvailableNegative8206 - 84428955.94
slc13 family permeaseD5687_00050Not AvailableNegative8630 - 1042662608.6
tryptophan--trna ligaseD5687_00055Not AvailablePositive10697 - 1171937744.5
nad(p)h-hydrate dehydrataseD5687_00060Not AvailablePositive11737 - 1334454777.6
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeD5687_00065Not AvailablePositive13331 - 1382517630.8
n-acetylmuramoyl-l-alanine amidaseD5687_00070Not AvailablePositive14052 - 1530845172.7
dna mismatch repair endonuclease mutlD5687_00075Not AvailablePositive15387 - 1719265629.3
trna (adenosine(37)-n6)-dimethylallyltransferase miaaD5687_00080Not AvailablePositive17195 - 1814234463.6
rna chaperone hfqD5687_00085Not AvailablePositive18369 - 186269505.36
gtpase hflxD5687_00090Not AvailablePositive18632 - 1998450398.4

Displaying genes 11 – 20 of 2214 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.