Guyparkeria sp. SCN-R1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Thioalkalibacteraceae

Genus

Guyparkeria

Description

Guyparkeria sp. SCN-R1 is a bacterial strain characterized by a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability and stability in various environments. The strain is cataloged under the accession number QZMT00000000.1, which allows for its identification and retrieval from genomic databases. The presence of only one replicon suggests that Guyparkeria sp. SCN-R1 may possess specific advantages in terms of replication efficiency and resource allocation. This trait could enable the organism to thrive in competitive microbial communities by efficiently managing its genetic material and metabolic processes. Ecologically, the characteristics of Guyparkeria sp. SCN-R1 may position it as a significant player in its native habitat, potentially influencing microbial dynamics and nutrient cycling. Its single replicon might facilitate rapid adaptation to environmental changes, contributing to its survival and ecological interactions. Further studies could elucidate its role in specific ecosystems and its interactions with other microbial species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyThioalkalibacteraceae
GenusGuyparkeria
SpeciesGuyparkeria sp. SCN-R1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Guyparkeria sp. SCN-R1 contig_00073, whole genome shotgun

Gene Summary

Adenine Count

423633 bp

Thymine Count

430013 bp

Guanine Count

793660 bp

Cytosine Count

770766 bp

Genome Length

2418072 bp

Protein-coding Genes

2163 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
potassium transporterD5687_01795Not AvailableNegative397021 - 39847253126.3
trk system potassium transporter trkaD5687_01800Not AvailableNegative398491 - 39986750429.7
sigma-54-dependent fis family transcriptional regulatorD5687_01805Not AvailableNegative399864 - 40126451954.9
hamp domain-containing proteinD5687_01810Not AvailableNegative401268 - 40367987980.8
duf4390 domain-containing proteinD5687_01815Not AvailableNegative403676 - 40425422071.7
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbD5687_01820Not AvailableNegative404251 - 40568152496.5
methionyl-trna formyltransferaseD5687_01825Not AvailableNegative405653 - 40660633929.1
peptide deformylaseD5687_01830Not AvailableNegative406603 - 40710919154.0
lysm domain-containing proteinD5687_01835Not AvailablePositive407335 - 40852843562.5
dna-protecting protein dpraD5687_01840Not AvailablePositive408631 - 40971637730.0

Displaying genes 361 – 370 of 2214 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.