Guyparkeria sp. SCN-R1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Thioalkalibacteraceae

Genus

Guyparkeria

Description

Guyparkeria sp. SCN-R1 is a bacterial strain characterized by a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability and stability in various environments. The strain is cataloged under the accession number QZMT00000000.1, which allows for its identification and retrieval from genomic databases. The presence of only one replicon suggests that Guyparkeria sp. SCN-R1 may possess specific advantages in terms of replication efficiency and resource allocation. This trait could enable the organism to thrive in competitive microbial communities by efficiently managing its genetic material and metabolic processes. Ecologically, the characteristics of Guyparkeria sp. SCN-R1 may position it as a significant player in its native habitat, potentially influencing microbial dynamics and nutrient cycling. Its single replicon might facilitate rapid adaptation to environmental changes, contributing to its survival and ecological interactions. Further studies could elucidate its role in specific ecosystems and its interactions with other microbial species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyThioalkalibacteraceae
GenusGuyparkeria
SpeciesGuyparkeria sp. SCN-R1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Guyparkeria sp. SCN-R1 contig_00073, whole genome shotgun

Gene Summary

Adenine Count

423633 bp

Thymine Count

430013 bp

Guanine Count

793660 bp

Cytosine Count

770766 bp

Genome Length

2418072 bp

Protein-coding Genes

2163 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transposaseD5687_01495Not AvailableNegative338351 - 3386029510.45
porinD5687_01500Not AvailableNegative338889 - 34010043095.9
lipoyl synthaseD5687_01505Not AvailableNegative340271 - 34120034131.9
lipoyl(octanoyl) transferase lipbD5687_01510Not AvailableNegative341548 - 34215622415.8
hypothetical proteinD5687_01515Not AvailableNegative342281 - 3424275358.28
duf493 domain-containing proteinD5687_01520Not AvailableNegative342434 - 34280513156.4
d-amino acid aminotransferaseD5687_01525Not AvailableNegative342802 - 34367431380.5
d-alanyl-d-alanine carboxypeptidaseD5687_01530Not AvailableNegative343674 - 34484642677.4
septal ring lytic transglycosylase rlpa family proteinD5687_01535Not AvailableNegative344843 - 34579334395.7
lytic murein transglycosylase bD5687_01540Not AvailableNegative345684 - 34672438238.4

Displaying genes 301 – 310 of 2214 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.