Guyparkeria sp. SCN-R1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Thioalkalibacteraceae

Genus

Guyparkeria

Description

Guyparkeria sp. SCN-R1 is a bacterial strain characterized by a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability and stability in various environments. The strain is cataloged under the accession number QZMT00000000.1, which allows for its identification and retrieval from genomic databases. The presence of only one replicon suggests that Guyparkeria sp. SCN-R1 may possess specific advantages in terms of replication efficiency and resource allocation. This trait could enable the organism to thrive in competitive microbial communities by efficiently managing its genetic material and metabolic processes. Ecologically, the characteristics of Guyparkeria sp. SCN-R1 may position it as a significant player in its native habitat, potentially influencing microbial dynamics and nutrient cycling. Its single replicon might facilitate rapid adaptation to environmental changes, contributing to its survival and ecological interactions. Further studies could elucidate its role in specific ecosystems and its interactions with other microbial species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyThioalkalibacteraceae
GenusGuyparkeria
SpeciesGuyparkeria sp. SCN-R1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Guyparkeria sp. SCN-R1 contig_00073, whole genome shotgun

Gene Summary

Adenine Count

423633 bp

Thymine Count

430013 bp

Guanine Count

793660 bp

Cytosine Count

770766 bp

Genome Length

2418072 bp

Protein-coding Genes

2163 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulatorD5687_01040Not AvailableNegative233493 - 23384012587.3
duf1538 domain-containing proteinD5687_01045Not AvailableNegative233865 - 23538553437.9
universal stress proteinD5687_01050Not AvailablePositive235522 - 23642132399.5
histone deacetylase family proteinD5687_01055Not AvailablePositive236549 - 23749034569.6
uracil-dna glycosylase family proteinD5687_01060Not AvailablePositive237480 - 23807922285.0
potassium/proton antiporterD5687_01065Not AvailableNegative238080 - 23980761935.8
hypothetical proteinD5687_01070Not AvailableNegative239980 - 24028511108.3
wyl domain-containing proteinD5687_01075Not AvailablePositive240405 - 24128933294.9
diguanylate cyclaseD5687_01080Not AvailableNegative241293 - 24267853146.8
heme-binding proteinD5687_01085Not AvailablePositive243010 - 24351016957.9

Displaying genes 211 – 220 of 2214 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.