Guyparkeria sp. SCN-R1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Thioalkalibacteraceae

Genus

Guyparkeria

Description

Guyparkeria sp. SCN-R1 is a bacterial strain characterized by a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability and stability in various environments. The strain is cataloged under the accession number QZMT00000000.1, which allows for its identification and retrieval from genomic databases. The presence of only one replicon suggests that Guyparkeria sp. SCN-R1 may possess specific advantages in terms of replication efficiency and resource allocation. This trait could enable the organism to thrive in competitive microbial communities by efficiently managing its genetic material and metabolic processes. Ecologically, the characteristics of Guyparkeria sp. SCN-R1 may position it as a significant player in its native habitat, potentially influencing microbial dynamics and nutrient cycling. Its single replicon might facilitate rapid adaptation to environmental changes, contributing to its survival and ecological interactions. Further studies could elucidate its role in specific ecosystems and its interactions with other microbial species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyThioalkalibacteraceae
GenusGuyparkeria
SpeciesGuyparkeria sp. SCN-R1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Guyparkeria sp. SCN-R1 contig_00073, whole genome shotgun

Gene Summary

Adenine Count

423633 bp

Thymine Count

430013 bp

Guanine Count

793660 bp

Cytosine Count

770766 bp

Genome Length

2418072 bp

Protein-coding Genes

2163 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
penicillin-binding protein 2D5687_00490Not AvailablePositive101225 - 10299463345.8
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseD5687_00495Not AvailablePositive102996 - 10451353885.2
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseD5687_00500Not AvailablePositive104510 - 10596450696.3
phospho-n-acetylmuramoyl-pentapeptide- transferaseD5687_00505Not AvailablePositive105945 - 10702738809.8
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseD5687_00510Not AvailablePositive107027 - 10849350143.5
putative lipid ii flippase ftswD5687_00515Not AvailablePositive108490 - 10974644534.8
undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseD5687_00520Not AvailablePositive109767 - 11088539065.0
udp-n-acetylmuramate--l-alanine ligaseD5687_00525Not AvailablePositive110930 - 11232150171.1
d-alanine--d-alanine ligaseD5687_00530Not AvailablePositive112318 - 11332535088.7
ftsq-type potra domain-containing proteinD5687_00535Not AvailablePositive113325 - 11413430225.3

Displaying genes 101 – 110 of 2214 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.