Oxalobacter sp.

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Oxalobacter

Description

Oxalobacter sp. is a Gram-negative bacterium characterized by its unique metabolic ability to utilize oxalate as a primary carbon source. This trait positions it as an important organism in biogeochemical cycles, particularly in the degradation of oxalates in various environments. The organism possesses a single replicon, which indicates a streamlined genetic architecture that may contribute to its efficiency in metabolizing oxalate. The data accession number for Oxalobacter sp. is QZKY00000000.1, which provides a reference point for genomic information pertaining to this bacterium. In ecological contexts, Oxalobacter sp. plays a significant role in the cycling of carbon and other nutrients. By breaking down oxalate, it can influence soil chemistry and contribute to the nutrient availability in ecosystems where it is present. This bacterium's ability to degrade oxalate not only aids in nutrient cycling but may also impact the dynamics of other microbial communities, potentially fostering a diverse microbial ecosystem in its habitat. Overall, the characteristics of Oxalobacter sp. highlight its ecological importance, particularly in environments rich in oxalate, and underscore the complex interactions within microbial communities in nutrient cycling processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusOxalobacter
SpeciesOxalobacter sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Oxalobacter sp. isolate SURF_1 Ga0104751_1005070, whole

Gene Summary

Adenine Count

538264 bp

Thymine Count

551793 bp

Guanine Count

632462 bp

Cytosine Count

598170 bp

Genome Length

2320689 bp

Protein-coding Genes

2126 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ump kinaseC4516_03995Not AvailableNegative809696 - 81041225746.6
elongation factor tsC4516_04000Not AvailableNegative810622 - 81153332113.7
30s ribosomal protein s2C4516_04005Not AvailableNegative811644 - 81238727339.4
nad(p)h-hydrate dehydrataseC4516_04010Not AvailablePositive812574 - 81412153770.6
endopeptidase laC4516_04015Not AvailableNegative814169 - 81657789336.8
atp-dependent clp protease atp-binding subunit clpxC4516_04020Not AvailableNegative816775 - 81804646212.7
atp-dependent clp endopeptidase proteolytic subunit clppC4516_04025Not AvailableNegative818204 - 81883022678.4
trigger factorC4516_04030Not AvailableNegative818870 - 82021649674.2
jab domain-containing proteinC4516_04035Not AvailableNegative820400 - 82107424403.5
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseC4516_04040Not AvailablePositive821167 - 82209633632.7

Displaying genes 851 – 860 of 2211 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.