Oxalobacter sp.

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Oxalobacter

Description

Oxalobacter sp. is a Gram-negative bacterium characterized by its unique metabolic ability to utilize oxalate as a primary carbon source. This trait positions it as an important organism in biogeochemical cycles, particularly in the degradation of oxalates in various environments. The organism possesses a single replicon, which indicates a streamlined genetic architecture that may contribute to its efficiency in metabolizing oxalate. The data accession number for Oxalobacter sp. is QZKY00000000.1, which provides a reference point for genomic information pertaining to this bacterium. In ecological contexts, Oxalobacter sp. plays a significant role in the cycling of carbon and other nutrients. By breaking down oxalate, it can influence soil chemistry and contribute to the nutrient availability in ecosystems where it is present. This bacterium's ability to degrade oxalate not only aids in nutrient cycling but may also impact the dynamics of other microbial communities, potentially fostering a diverse microbial ecosystem in its habitat. Overall, the characteristics of Oxalobacter sp. highlight its ecological importance, particularly in environments rich in oxalate, and underscore the complex interactions within microbial communities in nutrient cycling processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusOxalobacter
SpeciesOxalobacter sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Oxalobacter sp. isolate SURF_1 Ga0104751_1005070, whole

Gene Summary

Adenine Count

538264 bp

Thymine Count

551793 bp

Guanine Count

632462 bp

Cytosine Count

598170 bp

Genome Length

2320689 bp

Protein-coding Genes

2126 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmgC4516_01480Not AvailableNegative298610 - 30057172517.9
dihydroorotaseC4516_01485Not AvailableNegative300982 - 30202838784.6
cob(i)yrinic acid a,c-diamide adenosyltransferaseC4516_01490Not AvailablePositive302134 - 30268220177.3
hypothetical proteinC4516_01495Not AvailableNegative302753 - 30330720585.1
duf2141 domain-containing proteinC4516_01500Not AvailableNegative303574 - 30409218650.5
gtp cyclohydrolase i fole2C4516_01505Not AvailableNegative304405 - 30525331250.8
1-deoxy-d-xylulose-5-phosphate synthaseC4516_01510Not AvailableNegative305343 - 30721766957.9
polyprenyl synthetase family proteinC4516_01515Not AvailableNegative307219 - 30811231314.8
exodeoxyribonuclease vii small subunitC4516_01520Not AvailableNegative308112 - 3083578932.7
dmt family transporterC4516_01525Not AvailablePositive308674 - 30961234485.0

Displaying genes 351 – 360 of 2211 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.