Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis panacis |
| Strain | strain YIM PH21725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058491 bp
Thymine Count
1074607 bp
Guanine Count
2446944 bp
Cytosine Count
2398224 bp
Genome Length
6978358 bp
Protein-coding Genes
5915 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fatty acyl-amp ligase | D5S19_05170 | Not Available | Positive | 1131649 - 1133247 | 56537.3 |
| acyl carrier protein | D5S19_05175 | Not Available | Positive | 1133240 - 1133500 | 9109.98 |
| hypothetical protein | D5S19_05180 | Not Available | Positive | 1133514 - 1133831 | 11108.6 |
| hypothetical protein | D5S19_05185 | Not Available | Positive | 1133909 - 1136986 | 102561.0 |
| hypothetical protein | D5S19_05190 | Not Available | Positive | 1136994 - 1137422 | 16418.9 |
| pepsy domain-containing protein | D5S19_05195 | Not Available | Positive | 1137600 - 1138928 | 48144.4 |
| duf5134 domain-containing protein | D5S19_05200 | Not Available | Positive | 1138925 - 1139521 | 21293.9 |
| hypothetical protein | D5S19_05205 | Not Available | Negative | 1139537 - 1140364 | 29393.4 |
| sigma-70 family rna polymerase sigma factor | D5S19_05210 | Not Available | Positive | 1140376 - 1140951 | 21200.9 |
| is630 family transposase | D5S19_05220 | Not Available | Positive | 1142091 - 1143176 | 41383.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
