Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis panacis |
| Strain | strain YIM PH21725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058491 bp
Thymine Count
1074607 bp
Guanine Count
2446944 bp
Cytosine Count
2398224 bp
Genome Length
6978358 bp
Protein-coding Genes
5915 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| csbd family protein | D5S19_05120 | Not Available | Negative | 1122722 - 1122931 | 6892.03 |
| asp23/gls24 family envelope stress response protein | D5S19_05125 | Not Available | Positive | 1123129 - 1123590 | 15785.6 |
| hypothetical protein | D5S19_05130 | Not Available | Positive | 1123587 - 1123886 | 10067.1 |
| asp23/gls24 family envelope stress response protein | D5S19_05135 | Not Available | Positive | 1124070 - 1124450 | 12957.4 |
| hypothetical protein | D5S19_05140 | Not Available | Positive | 1124447 - 1124971 | 18626.9 |
| alkaline shock response membrane anchor protein amap | D5S19_05145 | Not Available | Positive | 1124971 - 1125543 | 21061.7 |
| s1 family peptidase | D5S19_05150 | Not Available | Positive | 1126108 - 1127235 | 37773.3 |
| dha2 family efflux mfs transporter permease subunit | D5S19_05155 | Not Available | Negative | 1127399 - 1128841 | 50081.1 |
| ionic transporter y4ha | D5S19_05160 | Not Available | Negative | 1129388 - 1130485 | 37749.2 |
| rna-binding s4 domain-containing protein | D5S19_05165 | Not Available | Negative | 1130571 - 1130936 | 13269.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
