Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis panacis |
| Strain | strain YIM PH21725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058491 bp
Thymine Count
1074607 bp
Guanine Count
2446944 bp
Cytosine Count
2398224 bp
Genome Length
6978358 bp
Protein-coding Genes
5915 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5S19_04910 | Not Available | Positive | 1069331 - 1070269 | 34068.7 |
| helix-turn-helix domain-containing protein | D5S19_04915 | Not Available | Positive | 1070423 - 1071355 | 33520.1 |
| sgcj/ecac family oxidoreductase | D5S19_04920 | Not Available | Positive | 1071327 - 1071794 | 17154.5 |
| hypothetical protein | D5S19_04925 | Not Available | Negative | 1072363 - 1072545 | 6728.86 |
| class i sam-dependent methyltransferase | D5S19_04930 | Not Available | Negative | 1072542 - 1073423 | 30587.4 |
| hypothetical protein | D5S19_04935 | Not Available | Negative | 1074639 - 1074902 | 10333.2 |
| whib family transcriptional regulator | D5S19_04940 | Not Available | Negative | 1074899 - 1075252 | 12363.7 |
| hypothetical protein | D5S19_04945 | Not Available | Negative | 1075399 - 1075638 | 8424.18 |
| atp-dependent dna helicase uvrd2 | D5S19_04950 | Not Available | Negative | 1075865 - 1077964 | 76337.9 |
| duf4191 domain-containing protein | D5S19_04955 | Not Available | Positive | 1078029 - 1078757 | 26508.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
