Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis panacis |
| Strain | strain YIM PH21725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058491 bp
Thymine Count
1074607 bp
Guanine Count
2446944 bp
Cytosine Count
2398224 bp
Genome Length
6978358 bp
Protein-coding Genes
5915 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | D5S19_04860 | Not Available | Positive | 1057203 - 1057409 | 6884.38 |
| hypothetical protein | D5S19_04865 | Not Available | Positive | 1057403 - 1057612 | 7390.52 |
| Trna-met | Not Available | Not Available | Positive | 1058286 - 1058362 | Not Available |
| upf0182 family protein | D5S19_04875 | Not Available | Negative | 1058431 - 1061421 | 107717.0 |
| hypothetical protein | D5S19_04880 | Not Available | Positive | 1061586 - 1062137 | 19226.7 |
| pdz domain-containing protein | D5S19_04885 | Not Available | Negative | 1062161 - 1063201 | 36319.3 |
| zinc-dependent metalloprotease | D5S19_04890 | Not Available | Positive | 1063372 - 1064787 | 50210.9 |
| m48 family peptidase | D5S19_04895 | Not Available | Negative | 1066024 - 1066533 | 19291.3 |
| hypothetical protein | D5S19_04900 | Not Available | Positive | 1066752 - 1067825 | 38224.2 |
| aarf/abc1/ubib kinase family protein | D5S19_04905 | Not Available | Positive | 1067886 - 1069229 | 48778.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
