Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis panacis |
| Strain | strain YIM PH21725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058491 bp
Thymine Count
1074607 bp
Guanine Count
2446944 bp
Cytosine Count
2398224 bp
Genome Length
6978358 bp
Protein-coding Genes
5915 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional salicylyl-coa 5-hydroxylase/oxidoreductase | D5S19_00430 | Not Available | Positive | 106278 - 108629 | 85840.3 |
| acyl-coa dehydrogenase | D5S19_00435 | Not Available | Positive | 108626 - 109786 | 40503.2 |
| gntr family transcriptional regulator | D5S19_00445 | Not Available | Negative | 110749 - 111447 | 25813.9 |
| mfs transporter | D5S19_00450 | Not Available | Positive | 111574 - 112839 | 44632.8 |
| putative hydro-lyase | D5S19_00455 | Not Available | Positive | 112836 - 113630 | 28911.3 |
| lamb/ycsf family protein | D5S19_00460 | Not Available | Positive | 113636 - 114385 | 26277.3 |
| allophanate hydrolase subunit 1 | D5S19_00465 | Not Available | Positive | 114385 - 114987 | 21498.4 |
| biotin-dependent carboxyltransferase | D5S19_00470 | Not Available | Positive | 114984 - 115859 | 30410.8 |
| alpha-ketoglutarate-dependent dioxygenase alkb | D5S19_00475 | Not Available | Negative | 115828 - 116469 | 23658.1 |
| precorrin-6a synthase (deacetylating) | D5S19_00480 | Not Available | Negative | 117676 - 118437 | 28755.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
