Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis panacis |
| Strain | strain YIM PH21725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058491 bp
Thymine Count
1074607 bp
Guanine Count
2446944 bp
Cytosine Count
2398224 bp
Genome Length
6978358 bp
Protein-coding Genes
5915 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate abc transporter substrate-binding protein | D5S19_04605 | Not Available | Positive | 1006958 - 1007788 | 29735.3 |
| atp-dependent helicase hrpb | D5S19_04610 | Not Available | Positive | 1007785 - 1010205 | 85733.6 |
| atp-binding cassette domain-containing protein | D5S19_04615 | Not Available | Positive | 1010283 - 1011197 | 32040.8 |
| abc transporter permease | D5S19_04620 | Not Available | Positive | 1011194 - 1011952 | 26324.6 |
| tetr family transcriptional regulator | D5S19_04625 | Not Available | Negative | 1011955 - 1012506 | 19387.4 |
| fad-dependent oxidoreductase | D5S19_04630 | Not Available | Positive | 1012556 - 1013680 | 39615.5 |
| sensor histidine kinase | D5S19_04640 | Not Available | Negative | 1014518 - 1016221 | 60856.1 |
| hypothetical protein | D5S19_04645 | Not Available | Positive | 1016147 - 1016356 | 7346.8 |
| hypothetical protein | D5S19_04650 | Not Available | Positive | 1016353 - 1017081 | 26888.1 |
| imidazolonepropionase | D5S19_04655 | Not Available | Negative | 1017245 - 1018390 | 39541.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
