Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis panacis |
| Strain | strain YIM PH21725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058491 bp
Thymine Count
1074607 bp
Guanine Count
2446944 bp
Cytosine Count
2398224 bp
Genome Length
6978358 bp
Protein-coding Genes
5915 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase 4 subunit a | D5S19_04555 | Not Available | Positive | 994583 - 998083 | 126326.0 |
| class i sam-dependent methyltransferase | D5S19_04560 | Not Available | Positive | 998170 - 998949 | 28120.6 |
| cytochrome p450 | D5S19_04565 | Not Available | Negative | 998956 - 1000146 | 44003.3 |
| hypothetical protein | D5S19_04570 | Not Available | Negative | 1000146 - 1002632 | 87106.5 |
| ybab/ebfc family dna-binding protein | D5S19_04575 | Not Available | Negative | 1003228 - 1003638 | 14698.5 |
| ybab/ebfc family dna-binding protein | D5S19_04580 | Not Available | Negative | 1003635 - 1004027 | 13896.3 |
| nlpc/p60 family protein | D5S19_04585 | Not Available | Negative | 1004031 - 1005137 | 37665.2 |
| hypothetical protein | D5S19_04590 | Not Available | Negative | 1005134 - 1005448 | 11298.1 |
| hypothetical protein | D5S19_04595 | Not Available | Negative | 1005526 - 1006335 | 28177.4 |
| doxx family membrane protein | D5S19_04600 | Not Available | Negative | 1006341 - 1006871 | 18146.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
