Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis panacis |
| Strain | strain YIM PH21725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058491 bp
Thymine Count
1074607 bp
Guanine Count
2446944 bp
Cytosine Count
2398224 bp
Genome Length
6978358 bp
Protein-coding Genes
5915 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | D5S19_04505 | Not Available | Negative | 981722 - 982744 | 35866.9 |
| abc transporter substrate-binding protein | D5S19_04510 | Not Available | Positive | 982927 - 984003 | 37114.6 |
| sugar abc transporter atp-binding protein | D5S19_04515 | Not Available | Positive | 983993 - 985585 | 56789.4 |
| abc transporter permease | D5S19_04520 | Not Available | Positive | 985557 - 986516 | 32560.1 |
| abc transporter permease | D5S19_04525 | Not Available | Positive | 986513 - 987493 | 33392.0 |
| glycoside hydrolase family 2 | D5S19_04530 | Not Available | Positive | 987526 - 990018 | 89676.1 |
| hypothetical protein | D5S19_04535 | Not Available | Negative | 990071 - 990478 | 14058.8 |
| nadph-dependent fmn reductase | D5S19_04540 | Not Available | Negative | 990546 - 991133 | 20782.8 |
| llm class flavin-dependent oxidoreductase | D5S19_04545 | Not Available | Negative | 991166 - 992254 | 40485.1 |
| type iia dna topoisomerase subunit b | D5S19_04550 | Not Available | Positive | 992499 - 994550 | 74394.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
