Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis panacis |
| Strain | strain YIM PH21725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058491 bp
Thymine Count
1074607 bp
Guanine Count
2446944 bp
Cytosine Count
2398224 bp
Genome Length
6978358 bp
Protein-coding Genes
5915 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix dna-binding domain-containing protein | D5S19_04395 | Not Available | Negative | 962554 - 963579 | 37696.5 |
| tetr/acrr family transcriptional regulator | D5S19_04400 | Not Available | Negative | 963771 - 964364 | 21817.3 |
| phenylacetate--coa ligase | D5S19_04405 | Not Available | Negative | 964361 - 965644 | 47398.6 |
| hydroxyphenylacetyl-coa thioesterase paai | D5S19_04410 | Not Available | Negative | 965641 - 966036 | 13906.4 |
| phenylacetic acid degradation bifunctional protein paaz | D5S19_04415 | Not Available | Positive | 966263 - 968293 | 71158.4 |
| 1,2-phenylacetyl-coa epoxidase subunit a | D5S19_04420 | Not Available | Positive | 968302 - 969228 | 35193.8 |
| 1,2-phenylacetyl-coa epoxidase subunit b | D5S19_04425 | Not Available | Positive | 969225 - 969509 | 10722.6 |
| phenylacetate-coa oxygenase subunit paai | D5S19_04430 | Not Available | Positive | 969523 - 970419 | 32294.9 |
| phenylacetate-coa oxygenase subunit paaj | D5S19_04435 | Not Available | Positive | 970413 - 970907 | 17666.1 |
| phenylacetate-coa oxygenase/reductase subunit paak | D5S19_04440 | Not Available | Positive | 970910 - 971986 | 38499.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
