Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis panacis |
| Strain | strain YIM PH21725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058491 bp
Thymine Count
1074607 bp
Guanine Count
2446944 bp
Cytosine Count
2398224 bp
Genome Length
6978358 bp
Protein-coding Genes
5915 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | D5S19_04285 | Not Available | Positive | 935808 - 936854 | 36674.9 |
| abc transporter atp-binding protein | D5S19_04290 | Not Available | Positive | 936880 - 937665 | 27728.4 |
| abc transporter permease | D5S19_04295 | Not Available | Positive | 937652 - 938536 | 30960.4 |
| ydcf family protein | D5S19_04300 | Not Available | Positive | 938594 - 939616 | 36291.4 |
| hypothetical protein | D5S19_04305 | Not Available | Negative | 939579 - 940781 | 44614.0 |
| hypothetical protein | D5S19_04310 | Not Available | Negative | 940898 - 942349 | 50771.5 |
| hypothetical protein | D5S19_04315 | Not Available | Negative | 942531 - 943031 | 17703.0 |
| hypothetical protein | D5S19_04320 | Not Available | Positive | 943361 - 947059 | 125511.0 |
| is5 family transposase | D5S19_04325 | Not Available | Positive | 947616 - 948412 | 29479.0 |
| is66 family transposase | D5S19_04330 | Not Available | Positive | 948633 - 950039 | 50897.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
