Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis panacis |
| Strain | strain YIM PH21725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058491 bp
Thymine Count
1074607 bp
Guanine Count
2446944 bp
Cytosine Count
2398224 bp
Genome Length
6978358 bp
Protein-coding Genes
5915 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-glu | Not Available | Not Available | Positive | 843054 - 843129 | Not Available |
| duf3500 domain-containing protein | D5S19_03835 | Not Available | Negative | 843720 - 843899 | 6703.68 |
| hypothetical protein | D5S19_03840 | Not Available | Negative | 844238 - 844537 | 10919.0 |
| group ii intron reverse transcriptase/maturase | D5S19_03845 | Not Available | Positive | 845702 - 846067 | 14053.0 |
| is3 family transposase | D5S19_03855 | Not Available | Negative | 847995 - 848835 | 31257.7 |
| polyketide synthase | D5S19_03860 | Not Available | Positive | 848836 - 849538 | 24822.4 |
| is3 family transposase | D5S19_03865 | Not Available | Negative | 849543 - 850227 | 24844.4 |
| universal stress protein | D5S19_03870 | Not Available | Negative | 850230 - 850835 | 21376.9 |
| is5 family transposase | D5S19_03875 | Not Available | Negative | 850836 - 851242 | 15656.3 |
| is5/is1182 family transposase | D5S19_03880 | Not Available | Negative | 851293 - 851427 | 4803.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
