Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis panacis |
| Strain | strain YIM PH21725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058491 bp
Thymine Count
1074607 bp
Guanine Count
2446944 bp
Cytosine Count
2398224 bp
Genome Length
6978358 bp
Protein-coding Genes
5915 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydrogenase | D5S19_03780 | Not Available | Positive | 830775 - 831818 | 36747.7 |
| hypothetical protein | D5S19_03785 | Not Available | Negative | 832324 - 832662 | 9933.25 |
| iron abc transporter permease | D5S19_03790 | Not Available | Positive | 833449 - 834537 | 36974.6 |
| abc transporter atp-binding protein | D5S19_03795 | Not Available | Positive | 834538 - 835326 | 27837.7 |
| abc transporter substrate-binding protein | D5S19_03800 | Not Available | Positive | 835319 - 836323 | 35708.5 |
| citramalate synthase | D5S19_03805 | Not Available | Positive | 836533 - 838158 | 57247.0 |
| faa hydrolase family protein | D5S19_03810 | Not Available | Positive | 838418 - 839188 | 27087.3 |
| fad-dependent oxidoreductase | D5S19_03815 | Not Available | Negative | 839738 - 840976 | 45135.7 |
| had family hydrolase | D5S19_03820 | Not Available | Positive | 842006 - 842842 | 29722.7 |
| Trna-gln | Not Available | Not Available | Positive | 842893 - 842964 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
