Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis panacis |
| Strain | strain YIM PH21725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058491 bp
Thymine Count
1074607 bp
Guanine Count
2446944 bp
Cytosine Count
2398224 bp
Genome Length
6978358 bp
Protein-coding Genes
5915 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | D5S19_02730 | Not Available | Positive | 616535 - 617053 | 19300.1 |
| glyoxalase | D5S19_02735 | Not Available | Positive | 617046 - 617912 | 31379.9 |
| hypothetical protein | D5S19_02740 | Not Available | Positive | 617965 - 618360 | 13897.2 |
| udp-glucose/gdp-mannose dehydrogenase family protein | D5S19_02745 | Not Available | Negative | 618514 - 619833 | 45700.1 |
| sdr family nad(p)-dependent oxidoreductase | D5S19_02750 | Not Available | Positive | 619990 - 620748 | 25862.0 |
| tm0106 family recb-like putative nuclease | D5S19_02755 | Not Available | Negative | 620819 - 622474 | 60969.9 |
| hypothetical protein | D5S19_02760 | Not Available | Positive | 622554 - 623018 | 16616.2 |
| glycine betaine abc transporter substrate-binding protein | D5S19_02765 | Not Available | Negative | 623081 - 624052 | 34896.3 |
| abc transporter permease | D5S19_02770 | Not Available | Negative | 624052 - 624831 | 27127.1 |
| atp-binding cassette domain-containing protein | D5S19_02775 | Not Available | Negative | 624828 - 626033 | 43657.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
