Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis panacis |
| Strain | strain YIM PH21725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058491 bp
Thymine Count
1074607 bp
Guanine Count
2446944 bp
Cytosine Count
2398224 bp
Genome Length
6978358 bp
Protein-coding Genes
5915 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5S19_02625 | Not Available | Negative | 591930 - 592436 | 18772.1 |
| dna-binding response regulator | D5S19_02630 | Not Available | Negative | 592443 - 593234 | 28639.5 |
| s49 family peptidase | D5S19_02635 | Not Available | Negative | 593318 - 594163 | 30058.2 |
| sensor histidine kinase | D5S19_02640 | Not Available | Negative | 594182 - 595492 | 47754.6 |
| fpg/nei family dna glycosylase | D5S19_02645 | Not Available | Negative | 596071 - 596931 | 30589.9 |
| duf983 domain-containing protein | D5S19_02650 | Not Available | Negative | 596970 - 597410 | 16410.8 |
| sigma-70 family rna polymerase sigma factor | D5S19_02655 | Not Available | Negative | 597519 - 599024 | 52019.5 |
| Trna-gly | Not Available | Not Available | Positive | 599234 - 599306 | Not Available |
| hypothetical protein | D5S19_02665 | Not Available | Negative | 599930 - 600331 | 14812.4 |
| duf2716 domain-containing protein | D5S19_02670 | Not Available | Negative | 600357 - 600902 | 20810.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
