Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis panacis |
| Strain | strain YIM PH21725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058491 bp
Thymine Count
1074607 bp
Guanine Count
2446944 bp
Cytosine Count
2398224 bp
Genome Length
6978358 bp
Protein-coding Genes
5915 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophanase | D5S19_01820 | Not Available | Positive | 412358 - 413725 | 48754.2 |
| atp-binding protein | D5S19_01825 | Not Available | Negative | 413888 - 414442 | 20249.7 |
| duf742 domain-containing protein | D5S19_01830 | Not Available | Negative | 414459 - 414827 | 13200.0 |
| roadblock/lc7 domain-containing protein | D5S19_01835 | Not Available | Negative | 414824 - 415249 | 15043.1 |
| hamp domain-containing protein | D5S19_01840 | Not Available | Negative | 415316 - 417667 | 84583.2 |
| abc transporter atp-binding protein | D5S19_01845 | Not Available | Negative | 417961 - 419709 | 59713.1 |
| abc transporter atp-binding protein | D5S19_01850 | Not Available | Negative | 419778 - 421430 | 56642.3 |
| sapb/amfs family lantipeptide | D5S19_01855 | Not Available | Negative | 421535 - 421669 | 4693.46 |
| serine/threonine protein kinase | D5S19_01860 | Not Available | Negative | 421709 - 424249 | 92820.6 |
| hypothetical protein | D5S19_01865 | Not Available | Positive | 424643 - 425008 | 12504.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
