Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis panacis |
| Strain | strain YIM PH21725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058491 bp
Thymine Count
1074607 bp
Guanine Count
2446944 bp
Cytosine Count
2398224 bp
Genome Length
6978358 bp
Protein-coding Genes
5915 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytotoxic translational repressor of toxin-antitoxin stability system | D5S19_01710 | Not Available | Positive | 389718 - 390140 | 15941.2 |
| tetr/acrr family transcriptional regulator | D5S19_01715 | Not Available | Positive | 390237 - 390779 | 19698.5 |
| hypothetical protein | D5S19_01720 | Not Available | Positive | 390923 - 391246 | 10698.8 |
| abc transporter permease | D5S19_01725 | Not Available | Negative | 391251 - 392837 | 54393.4 |
| abc transporter atp-binding protein | D5S19_01730 | Not Available | Negative | 392834 - 393733 | 32460.1 |
| marr family transcriptional regulator | D5S19_01735 | Not Available | Positive | 393827 - 394306 | 18206.7 |
| sigma-70 family rna polymerase sigma factor | D5S19_01745 | Not Available | Positive | 397067 - 397672 | 22203.6 |
| carboxypeptidase regulatory-like domain-containing protein | D5S19_01750 | Not Available | Positive | 397669 - 398151 | 17397.5 |
| chat domain-containing protein | D5S19_01755 | Not Available | Positive | 398193 - 400781 | 93007.5 |
| polysaccharide deacetylase family protein | D5S19_01760 | Not Available | Negative | 400804 - 401367 | 20965.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
