Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis panacis |
| Strain | strain YIM PH21725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058491 bp
Thymine Count
1074607 bp
Guanine Count
2446944 bp
Cytosine Count
2398224 bp
Genome Length
6978358 bp
Protein-coding Genes
5915 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | D5S19_01655 | Not Available | Positive | 382555 - 383202 | 23194.3 |
| hypothetical protein | D5S19_01665 | Not Available | Negative | 383347 - 383955 | 22012.0 |
| hypothetical protein | D5S19_01670 | Not Available | Negative | 383952 - 384701 | 26192.5 |
| atp-binding protein | D5S19_01675 | Not Available | Negative | 385707 - 386126 | 14944.1 |
| sigb/sigf/sigg family rna polymerase sigma factor | D5S19_01680 | Not Available | Negative | 386195 - 386971 | 28501.8 |
| anti-sigma factor | D5S19_01685 | Not Available | Negative | 386968 - 387384 | 15123.9 |
| whib family transcriptional regulator | D5S19_01690 | Not Available | Positive | 387537 - 387845 | 11648.9 |
| anti-sigma factor antagonist | D5S19_01695 | Not Available | Positive | 388064 - 388417 | 12208.4 |
| metal-dependent hydrolase | D5S19_01700 | Not Available | Positive | 388478 - 389263 | 27312.4 |
| prevent-host-death protein | D5S19_01705 | Not Available | Positive | 389311 - 389721 | 15090.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
