Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis panacis |
| Strain | strain YIM PH21725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058491 bp
Thymine Count
1074607 bp
Guanine Count
2446944 bp
Cytosine Count
2398224 bp
Genome Length
6978358 bp
Protein-coding Genes
5915 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetoacetate--coa ligase | D5S19_01555 | Not Available | Positive | 360284 - 362263 | 71455.3 |
| duf2156 domain-containing protein | D5S19_01560 | Not Available | Positive | 362307 - 364016 | 62440.2 |
| Trna-ser | Not Available | Not Available | Positive | 364083 - 364172 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 364214 - 364287 | Not Available |
| type ii toxin-antitoxin system phd/yefm family antitoxin | D5S19_01575 | Not Available | Positive | 364582 - 364983 | 14605.1 |
| type ii toxin-antitoxin system rele/pare family toxin | D5S19_01580 | Not Available | Positive | 364931 - 365344 | 15057.3 |
| coce/nond family hydrolase | D5S19_01585 | Not Available | Positive | 365543 - 367489 | 71585.6 |
| alpha/beta hydrolase | D5S19_01590 | Not Available | Positive | 367431 - 368348 | 33648.8 |
| lysr family transcriptional regulator | D5S19_01595 | Not Available | Negative | 368323 - 369345 | 37272.6 |
| asparaginase | D5S19_01600 | Not Available | Positive | 369438 - 370409 | 33810.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
