Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis panacis |
| Strain | strain YIM PH21725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058491 bp
Thymine Count
1074607 bp
Guanine Count
2446944 bp
Cytosine Count
2398224 bp
Genome Length
6978358 bp
Protein-coding Genes
5915 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine ammonia-lyase | D5S19_00100 | Not Available | Negative | 16014 - 17219 | 41568.6 |
| 30s ribosomal protein s12 methylthiotransferase rimo | D5S19_00110 | Not Available | Positive | 18007 - 19446 | 51542.4 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | D5S19_00115 | Not Available | Positive | 19443 - 20093 | 22491.9 |
| nicotinamide-nucleotide amidohydrolase family protein | D5S19_00120 | Not Available | Positive | 20090 - 20554 | 15284.5 |
| xre family transcriptional regulator | D5S19_00125 | Not Available | Positive | 20651 - 21094 | 15922.1 |
| pspa/im30 family protein | D5S19_00130 | Not Available | Positive | 21359 - 22210 | 30612.0 |
| hypothetical protein | D5S19_00135 | Not Available | Positive | 22242 - 23228 | 34916.7 |
| allophanate hydrolase | D5S19_00140 | Not Available | Positive | 23537 - 25285 | 59693.3 |
| quinone-dependent dihydroorotate dehydrogenase | D5S19_00145 | Not Available | Negative | 25993 - 27024 | 36010.5 |
| transposase | D5S19_00150 | Not Available | Positive | 27631 - 27788 | 5983.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
