Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis panacis |
| Strain | strain YIM PH21725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058491 bp
Thymine Count
1074607 bp
Guanine Count
2446944 bp
Cytosine Count
2398224 bp
Genome Length
6978358 bp
Protein-coding Genes
5915 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease | D5S19_01225 | Not Available | Negative | 287860 - 288231 | 12895.4 |
| pucr family transcriptional regulator | D5S19_01230 | Not Available | Negative | 288259 - 289914 | 58852.5 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | D5S19_01235 | Not Available | Positive | 290054 - 291550 | 52259.8 |
| hypothetical protein | D5S19_01240 | Not Available | Negative | 291590 - 292096 | 18712.9 |
| hypothetical protein | D5S19_01245 | Not Available | Negative | 292093 - 293265 | 40077.8 |
| hypothetical protein | D5S19_01250 | Not Available | Negative | 293262 - 293585 | 11005.8 |
| ybab/ebfc family dna-binding protein | D5S19_01255 | Not Available | Negative | 293589 - 294020 | 15423.8 |
| heat-inducible transcriptional repressor hrca | D5S19_01260 | Not Available | Positive | 294249 - 295274 | 37111.8 |
| molecular chaperone dnaj | D5S19_01265 | Not Available | Positive | 295316 - 296476 | 40507.1 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | D5S19_01270 | Not Available | Positive | 296479 - 297231 | 25655.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
