Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis panacis |
| Strain | strain YIM PH21725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058491 bp
Thymine Count
1074607 bp
Guanine Count
2446944 bp
Cytosine Count
2398224 bp
Genome Length
6978358 bp
Protein-coding Genes
5915 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | D5S19_01175 | Not Available | Negative | 277652 - 278143 | 17726.2 |
| signal peptidase i | D5S19_01180 | Not Available | Negative | 278251 - 279126 | 30866.9 |
| murein l,d-transpeptidase | D5S19_01185 | Not Available | Positive | 279280 - 279786 | 17616.0 |
| nad(p)/fad-dependent oxidoreductase | D5S19_01190 | Not Available | Negative | 279814 - 280992 | 40956.7 |
| bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | D5S19_01195 | Not Available | Negative | 280989 - 281306 | 11254.3 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | D5S19_01200 | Not Available | Positive | 281632 - 282759 | 42136.1 |
| formyltetrahydrofolate deformylase | D5S19_01205 | Not Available | Positive | 282642 - 283604 | 35443.7 |
| fad-dependent oxidoreductase | D5S19_01210 | Not Available | Positive | 283632 - 286076 | 88833.6 |
| hypothetical protein | D5S19_01215 | Not Available | Positive | 286106 - 286567 | 14971.7 |
| aldo/keto reductase | D5S19_01220 | Not Available | Positive | 286633 - 287454 | 29953.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
