Amycolatopsis panacis strain YIM PH21725

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis panacis strain YIM PH21725 is a bacterial strain identified within the genus Amycolatopsis. This strain possesses a notable characteristic: the presence of flagella, which are structures that can facilitate motility in bacteria. Such mobility may play a role in the organism's ability to navigate its environment, potentially influencing its ecological interactions and survival. The strain is characterized by having a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability and efficiency in its habitat. The sequence data for Amycolatopsis panacis strain YIM PH21725 is cataloged under the accession number QZFV00000000.1, which provides a reference point for researchers looking into its genetic makeup and related studies. The presence of flagella combined with a single replicon suggests that Amycolatopsis panacis strain YIM PH21725 may be well-adapted to its ecological niche, potentially allowing it to exploit resources effectively in its environment. This adaptability could be significant in various ecological contexts, including soil or aquatic ecosystems, where motility and genetic stability are advantageous for survival and resource acquisition. Overall, the traits of this strain underline its biological significance and potential roles within microbial communities.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis panacis
Strainstrain YIM PH21725

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis panacis strain YIM PH21725 NODE_9, whole genome

Gene Summary

Adenine Count

1058491 bp

Thymine Count

1074607 bp

Guanine Count

2446944 bp

Cytosine Count

2398224 bp

Genome Length

6978358 bp

Protein-coding Genes

5915 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arsr family transcriptional regulatorD5S19_00040Not AvailableNegative5662 - 624020255.2
pseudouridylate synthaseD5S19_00045Not AvailableNegative6315 - 728336755.5
hypothetical proteinD5S19_00050Not AvailableNegative7296 - 768814868.0
marr family transcriptional regulatorD5S19_00055Not AvailablePositive7819 - 827716616.2
mfs transporterD5S19_00060Not AvailableNegative8289 - 983653626.0
duf1015 family proteinD5S19_00065Not AvailablePositive9931 - 1107339512.6
atp-dependent dna ligaseD5S19_00080Not AvailablePositive12456 - 1346636895.1
hypothetical proteinD5S19_00085Not AvailableNegative13498 - 137679374.09
lrp/asnc family transcriptional regulatorD5S19_00090Not AvailableNegative14148 - 1461516562.1
4-hydroxyphenylpyruvate dioxygenaseD5S19_00095Not AvailablePositive14736 - 1593544553.6

Displaying genes 11 – 20 of 2385 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.