Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis panacis |
| Strain | strain YIM PH21725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058491 bp
Thymine Count
1074607 bp
Guanine Count
2446944 bp
Cytosine Count
2398224 bp
Genome Length
6978358 bp
Protein-coding Genes
5915 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit gamma | D5S19_05445 | Not Available | Positive | 1194753 - 1195346 | 20876.6 |
| gntr family transcriptional regulator | D5S19_05450 | Not Available | Negative | 1195463 - 1196131 | 24957.2 |
| tetr family transcriptional regulator | D5S19_05455 | Not Available | Negative | 1196397 - 1196981 | 20850.7 |
| aldehyde dehydrogenase family protein | D5S19_05460 | Not Available | Positive | 1197123 - 1198586 | 51668.3 |
| choline dehydrogenase | D5S19_05465 | Not Available | Positive | 1198621 - 1200276 | 60927.3 |
| voc family protein | D5S19_05470 | Not Available | Positive | 1200451 - 1201278 | 29669.6 |
| nitroreductase family deazaflavin-dependent oxidoreductase | D5S19_05480 | Not Available | Negative | 1201832 - 1202251 | 14742.9 |
| marr family transcriptional regulator | D5S19_05485 | Not Available | Positive | 1202396 - 1202887 | 17947.5 |
| hypothetical protein | D5S19_05490 | Not Available | Positive | 1203191 - 1203484 | 10375.4 |
| methyltransferase domain-containing protein | D5S19_05495 | Not Available | Positive | 1204282 - 1205121 | 30665.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
