Amycolatopsis panacis strain YIM PH21725

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis panacis strain YIM PH21725 is a bacterial strain identified within the genus Amycolatopsis. This strain possesses a notable characteristic: the presence of flagella, which are structures that can facilitate motility in bacteria. Such mobility may play a role in the organism's ability to navigate its environment, potentially influencing its ecological interactions and survival. The strain is characterized by having a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability and efficiency in its habitat. The sequence data for Amycolatopsis panacis strain YIM PH21725 is cataloged under the accession number QZFV00000000.1, which provides a reference point for researchers looking into its genetic makeup and related studies. The presence of flagella combined with a single replicon suggests that Amycolatopsis panacis strain YIM PH21725 may be well-adapted to its ecological niche, potentially allowing it to exploit resources effectively in its environment. This adaptability could be significant in various ecological contexts, including soil or aquatic ecosystems, where motility and genetic stability are advantageous for survival and resource acquisition. Overall, the traits of this strain underline its biological significance and potential roles within microbial communities.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis panacis
Strainstrain YIM PH21725

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis panacis strain YIM PH21725 NODE_9, whole genome

Gene Summary

Adenine Count

1058491 bp

Thymine Count

1074607 bp

Guanine Count

2446944 bp

Cytosine Count

2398224 bp

Genome Length

6978358 bp

Protein-coding Genes

5915 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sarcosine oxidase subunit gammaD5S19_05445Not AvailablePositive1194753 - 119534620876.6
gntr family transcriptional regulatorD5S19_05450Not AvailableNegative1195463 - 119613124957.2
tetr family transcriptional regulatorD5S19_05455Not AvailableNegative1196397 - 119698120850.7
aldehyde dehydrogenase family proteinD5S19_05460Not AvailablePositive1197123 - 119858651668.3
choline dehydrogenaseD5S19_05465Not AvailablePositive1198621 - 120027660927.3
voc family proteinD5S19_05470Not AvailablePositive1200451 - 120127829669.6
nitroreductase family deazaflavin-dependent oxidoreductaseD5S19_05480Not AvailableNegative1201832 - 120225114742.9
marr family transcriptional regulatorD5S19_05485Not AvailablePositive1202396 - 120288717947.5
hypothetical proteinD5S19_05490Not AvailablePositive1203191 - 120348410375.4
methyltransferase domain-containing proteinD5S19_05495Not AvailablePositive1204282 - 120512130665.9

Displaying genes 1021 – 1030 of 2385 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.