Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis panacis |
| Strain | strain YIM PH21725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058491 bp
Thymine Count
1074607 bp
Guanine Count
2446944 bp
Cytosine Count
2398224 bp
Genome Length
6978358 bp
Protein-coding Genes
5915 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyisobutyrate dehydrogenase | D5S19_05340 | Not Available | Positive | 1171937 - 1172815 | 29207.8 |
| enoyl-coa hydratase | D5S19_05345 | Not Available | Positive | 1172812 - 1173579 | 27438.2 |
| hypothetical protein | D5S19_05350 | Not Available | Negative | 1173870 - 1174103 | 8734.45 |
| acyl-coa dehydrogenase | D5S19_05360 | Not Available | Positive | 1176139 - 1177182 | 37160.3 |
| methyltransferase | D5S19_05365 | Not Available | Positive | 1177192 - 1177992 | 28774.1 |
| ribbon-helix-helix protein, copg family | D5S19_05370 | Not Available | Positive | 1178366 - 1178587 | 7754.77 |
| type ii toxin-antitoxin system pemk/mazf family toxin | D5S19_05375 | Not Available | Positive | 1178591 - 1178938 | 12606.2 |
| type i-e crispr-associated endoribonuclease cas2 | D5S19_05380 | Not Available | Negative | 1179396 - 1179764 | 13724.6 |
| type i-e crispr-associated endonuclease cas1 | D5S19_05385 | Not Available | Negative | 1179761 - 1180726 | 35276.6 |
| type i-e crispr-associated protein cas6/cse3/case | D5S19_05390 | Not Available | Negative | 1180719 - 1181381 | 24459.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
