Nocardia panacis strain YIM PH 21724

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Nocardia

Description

Nocardia panacis strain YIM PH 21724 is characterized by the presence of flagella, which may contribute to its motility and ability to colonize various environments. This bacterium possesses a single replicon, indicating a streamlined genomic organization that can facilitate efficient replication and adaptation. The strain is cataloged under the accession number QZFU00000000.1, which allows for its identification and retrieval in genomic databases. Such accessions are crucial for researchers aiming to study the genomic features and potential applications of this organism. Nocardia species, including N. panacis, are known for their ecological roles, particularly in soil and organic matter decomposition. They can degrade complex organic compounds, which highlights their importance in nutrient cycling within ecosystems. The presence of flagella in N. panacis strain YIM PH 21724 may enhance its ecological versatility, allowing it to navigate through soil matrices and interact with other microbial populations. This motility could facilitate its role in biogeochemical processes, contributing to soil health and fertility. Overall, N. panacis strain YIM PH 21724 exemplifies the adaptations of soil-dwelling bacteria and underscores the significance of microbial motility in ecological interactions and nutrient cycling.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusNocardia
SpeciesNocardia panacis
Strainstrain YIM PH 21724

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardia panacis strain YIM PH 21724 NODE_994, whole genome

Gene Summary

Adenine Count

1221062 bp

Thymine Count

1207971 bp

Guanine Count

2452046 bp

Cytosine Count

2481298 bp

Genome Length

7362956 bp

Protein-coding Genes

6460 genes

Non-Coding Genes

212 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
moad/this family proteinD5S18_03530Not AvailableNegative741067 - 7413429522.4
m67 family peptidaseD5S18_03535Not AvailableNegative741379 - 74180415995.5
peptidase s58 family proteinD5S18_03540Not AvailableNegative741857 - 74294536085.0
duf2017 domain-containing proteinD5S18_03545Not AvailableNegative742959 - 74352820454.2
atp-dependent clp protease adapter clpsD5S18_03550Not AvailableNegative743551 - 74387712228.6
nicotinate phosphoribosyltransferaseD5S18_03555Not AvailablePositive744046 - 74538346610.3
isochorismatase family proteinD5S18_03560Not AvailablePositive745448 - 74601119337.4
atp-dependent dna helicaseD5S18_03565Not AvailablePositive746051 - 74810272435.4
methyltransferase domain-containing proteinD5S18_03570Not AvailablePositive748357 - 74899524028.2
doxx family proteinD5S18_03575Not AvailableNegative749046 - 74958818730.1

Displaying genes 831 – 840 of 6672 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.