Nocardia panacis strain YIM PH 21724

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Nocardia

Description

Nocardia panacis strain YIM PH 21724 is characterized by the presence of flagella, which may contribute to its motility and ability to colonize various environments. This bacterium possesses a single replicon, indicating a streamlined genomic organization that can facilitate efficient replication and adaptation. The strain is cataloged under the accession number QZFU00000000.1, which allows for its identification and retrieval in genomic databases. Such accessions are crucial for researchers aiming to study the genomic features and potential applications of this organism. Nocardia species, including N. panacis, are known for their ecological roles, particularly in soil and organic matter decomposition. They can degrade complex organic compounds, which highlights their importance in nutrient cycling within ecosystems. The presence of flagella in N. panacis strain YIM PH 21724 may enhance its ecological versatility, allowing it to navigate through soil matrices and interact with other microbial populations. This motility could facilitate its role in biogeochemical processes, contributing to soil health and fertility. Overall, N. panacis strain YIM PH 21724 exemplifies the adaptations of soil-dwelling bacteria and underscores the significance of microbial motility in ecological interactions and nutrient cycling.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusNocardia
SpeciesNocardia panacis
Strainstrain YIM PH 21724

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardia panacis strain YIM PH 21724 NODE_994, whole genome

Gene Summary

Adenine Count

1221062 bp

Thymine Count

1207971 bp

Guanine Count

2452046 bp

Cytosine Count

2481298 bp

Genome Length

7362956 bp

Protein-coding Genes

6460 genes

Non-Coding Genes

212 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseD5S18_03430Not AvailableNegative722931 - 72379730500.7
abc transporter permeaseD5S18_03435Not AvailableNegative723794 - 72464829124.2
ionic transporter y4haD5S18_03440Not AvailableNegative724848 - 72593336524.7
duf4377 domain-containing proteinD5S18_03445Not AvailablePositive725932 - 72637815912.9
phosphate uptake regulator, phouD5S18_03450Not AvailablePositive726577 - 72717621468.8
lysr family transcriptional regulatorD5S18_03455Not AvailableNegative727173 - 72808132072.3
c4-dicarboxylate abc transporterD5S18_03460Not AvailablePositive728152 - 72926138697.5
hnh endonucleaseD5S18_03465Not AvailablePositive729390 - 73010626094.7
fad-dependent monooxygenaseD5S18_03470Not AvailableNegative730147 - 73135243137.0
padr family transcriptional regulatorD5S18_03475Not AvailableNegative731536 - 73218924589.6

Displaying genes 811 – 820 of 6672 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.