Vallicoccus soli strain YIM 75000

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Motilibacterales

Family

Vallicoccaceae

Genus

Vallicoccus

Description

Vallicoccus soli strain YIM 75000 is characterized by possessing a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability in specific environments. This strain is cataloged under the accession number QZEZ00000000.1, providing a reference for genetic and taxonomic studies. As a member of the Vallicoccus genus, this strain is likely to exhibit traits common to its relatives, including potential roles in nutrient cycling and interactions with other microorganisms in its habitat. Although specific physiological characteristics and ecological roles of Vallicoccus soli strain YIM 75000 are not detailed, the presence of a single replicon suggests an efficient genomic organization that may enhance its stability and resilience in fluctuating environmental conditions. In summary, the genomic simplicity of Vallicoccus soli strain YIM 75000, indicated by its single replicon, may allow for specialized adaptations to its ecological niche. This efficiency could be significant in microbial communities where competition for resources is intense, thus fostering its survival and functional roles in soil microbiomes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMotilibacterales
FamilyVallicoccaceae
GenusVallicoccus
SpeciesVallicoccus soli
Strainstrain YIM 75000

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vallicoccus soli strain YIM 75000 Scaffold20, whole genome shotgun

Gene Summary

Adenine Count

464506 bp

Thymine Count

467035 bp

Guanine Count

1560712 bp

Cytosine Count

1553071 bp

Genome Length

4045354 bp

Protein-coding Genes

3658 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cysteine desulfuraseD5H78_04715Not AvailablePositive1005957 - 100714740063.8
trna 2-thiouridine(34) synthase mnmaD5H78_04720Not AvailablePositive1007149 - 100831840490.9
methionine synthaseD5H78_04725Not AvailablePositive1008315 - 100936134767.7
nad-dependent dna ligase ligaD5H78_04730Not AvailablePositive1009362 - 101150677661.1
pdz domain-containing proteinD5H78_04735Not AvailableNegative1011604 - 101287841548.2
sensor histidine kinaseD5H78_04740Not AvailableNegative1012914 - 101436550470.7
dna-binding response regulatorD5H78_04745Not AvailableNegative1014458 - 101515025284.4
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatcD5H78_04750Not AvailablePositive1015243 - 101554210624.6
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataD5H78_04755Not AvailablePositive1015539 - 101704451933.7
hypothetical proteinD5H78_04760Not AvailablePositive1017041 - 10172537293.86

Displaying genes 921 – 930 of 3708 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.