Vallicoccus soli strain YIM 75000

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Motilibacterales

Family

Vallicoccaceae

Genus

Vallicoccus

Description

Vallicoccus soli strain YIM 75000 is characterized by possessing a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability in specific environments. This strain is cataloged under the accession number QZEZ00000000.1, providing a reference for genetic and taxonomic studies. As a member of the Vallicoccus genus, this strain is likely to exhibit traits common to its relatives, including potential roles in nutrient cycling and interactions with other microorganisms in its habitat. Although specific physiological characteristics and ecological roles of Vallicoccus soli strain YIM 75000 are not detailed, the presence of a single replicon suggests an efficient genomic organization that may enhance its stability and resilience in fluctuating environmental conditions. In summary, the genomic simplicity of Vallicoccus soli strain YIM 75000, indicated by its single replicon, may allow for specialized adaptations to its ecological niche. This efficiency could be significant in microbial communities where competition for resources is intense, thus fostering its survival and functional roles in soil microbiomes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMotilibacterales
FamilyVallicoccaceae
GenusVallicoccus
SpeciesVallicoccus soli
Strainstrain YIM 75000

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vallicoccus soli strain YIM 75000 Scaffold20, whole genome shotgun

Gene Summary

Adenine Count

464506 bp

Thymine Count

467035 bp

Guanine Count

1560712 bp

Cytosine Count

1553071 bp

Genome Length

4045354 bp

Protein-coding Genes

3658 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lycopene cyclaseD5H78_00405Not AvailablePositive77319 - 7857544298.2
cation diffusion facilitator family transporterD5H78_00410Not AvailablePositive78586 - 7949432185.1
eal domain-containing proteinD5H78_00415Not AvailableNegative79508 - 8100753626.4
duf3618 domain-containing proteinD5H78_00420Not AvailableNegative81109 - 8175923037.7
phage holin family proteinD5H78_00425Not AvailableNegative81735 - 8205811628.2
hypothetical proteinD5H78_00430Not AvailableNegative82235 - 8305627166.0
rok family proteinD5H78_00435Not AvailableNegative83118 - 8395429631.5
amino acid-binding proteinD5H78_00440Not AvailableNegative84003 - 8464121491.9
nad(p)/fad-dependent oxidoreductaseD5H78_00445Not AvailablePositive84818 - 8622748849.9
Trna-serNot AvailableNot AvailablePositive86276 - 86368Not Available

Displaying genes 81 – 90 of 3708 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.