Vallicoccus soli strain YIM 75000

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Motilibacterales

Family

Vallicoccaceae

Genus

Vallicoccus

Description

Vallicoccus soli strain YIM 75000 is characterized by possessing a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability in specific environments. This strain is cataloged under the accession number QZEZ00000000.1, providing a reference for genetic and taxonomic studies. As a member of the Vallicoccus genus, this strain is likely to exhibit traits common to its relatives, including potential roles in nutrient cycling and interactions with other microorganisms in its habitat. Although specific physiological characteristics and ecological roles of Vallicoccus soli strain YIM 75000 are not detailed, the presence of a single replicon suggests an efficient genomic organization that may enhance its stability and resilience in fluctuating environmental conditions. In summary, the genomic simplicity of Vallicoccus soli strain YIM 75000, indicated by its single replicon, may allow for specialized adaptations to its ecological niche. This efficiency could be significant in microbial communities where competition for resources is intense, thus fostering its survival and functional roles in soil microbiomes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMotilibacterales
FamilyVallicoccaceae
GenusVallicoccus
SpeciesVallicoccus soli
Strainstrain YIM 75000

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vallicoccus soli strain YIM 75000 Scaffold20, whole genome shotgun

Gene Summary

Adenine Count

464506 bp

Thymine Count

467035 bp

Guanine Count

1560712 bp

Cytosine Count

1553071 bp

Genome Length

4045354 bp

Protein-coding Genes

3658 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome small subunit-dependent gtpase aD5H78_04050Not AvailableNegative862499 - 86354237054.0
3-phosphoshikimate 1-carboxyvinyltransferaseD5H78_04055Not AvailableNegative863539 - 86484944415.3
doxx family proteinD5H78_04060Not AvailableNegative864926 - 86543817882.0
sos response-associated peptidaseD5H78_04065Not AvailablePositive865521 - 86626127206.2
hydrolaseD5H78_04075Not AvailableNegative868499 - 86911621050.6
sigma-70 family rna polymerase sigma factorD5H78_04080Not AvailablePositive869355 - 86997523601.6
mycothiol system anti-sigma-r factorD5H78_04085Not AvailablePositive869972 - 87024710398.6
hypothetical proteinD5H78_04090Not AvailablePositive870578 - 8708929804.32
biotin/lipoyl-binding carrier proteinD5H78_04095Not AvailablePositive871055 - 8712707263.82
pilt/pilu family type 4a pilus atpaseD5H78_04100Not AvailablePositive871417 - 87246337354.1

Displaying genes 791 – 800 of 3708 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.