Vallicoccus soli strain YIM 75000

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Motilibacterales

Family

Vallicoccaceae

Genus

Vallicoccus

Description

Vallicoccus soli strain YIM 75000 is characterized by possessing a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability in specific environments. This strain is cataloged under the accession number QZEZ00000000.1, providing a reference for genetic and taxonomic studies. As a member of the Vallicoccus genus, this strain is likely to exhibit traits common to its relatives, including potential roles in nutrient cycling and interactions with other microorganisms in its habitat. Although specific physiological characteristics and ecological roles of Vallicoccus soli strain YIM 75000 are not detailed, the presence of a single replicon suggests an efficient genomic organization that may enhance its stability and resilience in fluctuating environmental conditions. In summary, the genomic simplicity of Vallicoccus soli strain YIM 75000, indicated by its single replicon, may allow for specialized adaptations to its ecological niche. This efficiency could be significant in microbial communities where competition for resources is intense, thus fostering its survival and functional roles in soil microbiomes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMotilibacterales
FamilyVallicoccaceae
GenusVallicoccus
SpeciesVallicoccus soli
Strainstrain YIM 75000

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vallicoccus soli strain YIM 75000 Scaffold20, whole genome shotgun

Gene Summary

Adenine Count

464506 bp

Thymine Count

467035 bp

Guanine Count

1560712 bp

Cytosine Count

1553071 bp

Genome Length

4045354 bp

Protein-coding Genes

3658 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar abc transporter permease yjffD5H78_01995Not AvailablePositive398745 - 39978236094.9
l-arabinose isomeraseD5H78_02000Not AvailablePositive399866 - 40137154141.6
laci family dna-binding transcriptional regulatorD5H78_02005Not AvailablePositive401544 - 40252134932.7
sdr family oxidoreductaseD5H78_02010Not AvailablePositive402565 - 40338328400.4
hypothetical proteinD5H78_02015Not AvailablePositive403515 - 4037938970.67
helicaseD5H78_02025Not AvailableNegative405306 - 40695861245.9
glsb/yeaq/ymge family stress response membrane proteinD5H78_02030Not AvailableNegative407102 - 4073658608.03
mosc domain-containing proteinD5H78_02035Not AvailablePositive407487 - 40817024231.1
abc transporter permeaseD5H78_02040Not AvailableNegative408490 - 40926627613.5
abc transporter atp-binding proteinD5H78_02045Not AvailableNegative409263 - 41020433583.4

Displaying genes 391 – 400 of 3708 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.