Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail protein | D5071_04620 | Not Available | Positive | 984845 - 986005 | 42171.1 |
| Phage baseplate assembly protein | D5071_04625 | Not Available | Positive | 986002 - 986583 | 20367.8 |
| Baseplate assembly protein | D5071_04630 | Not Available | Positive | 986642 - 986989 | 13015.7 |
| Baseplate protein | D5071_04635 | Not Available | Positive | 986980 - 988083 | 39286.5 |
| Gp25, tail fiber | D5071_04640 | Not Available | Positive | 988076 - 988657 | 21776.8 |
| Tail fiber protein | D5071_04645 | Not Available | Positive | 988660 - 990246 | 56141.7 |
| Dna invertase | D5071_04650 | Not Available | Positive | 991382 - 991519 | 4923.84 |
| Attl | Not Available | Not Available | Positive | 1761691 - 1761702 | Not Available |
| prevent-host-death protein | D5071_08155 | Not Available | Negative | 1761871 - 1762122 | 9052.82 |
| hypothetical protein | D5071_08160 | Not Available | Positive | 1762371 - 1762916 | 20808.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
