Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Gp37 | D5071_04570 | Not Available | Positive | 977589 - 978056 | 17411.8 |
| Gp12 | D5071_04575 | Not Available | Positive | 978053 - 978250 | 7031.44 |
| Major tail sheath protein | D5071_04580 | Not Available | Positive | 978240 - 979667 | 51255.7 |
| Gp14, phage major tail tube protein | D5071_04585 | Not Available | Positive | 979667 - 980191 | 19472.6 |
| Ferredoxin | D5071_04590 | Not Available | Positive | 980248 - 980544 | 10903.5 |
| Gp41 | D5071_04595 | Not Available | Positive | 980684 - 981004 | 11565.6 |
| gpe family phage tail protein | D5071_04600 | Not Available | Positive | 980973 - 981092 | 4802.39 |
| Bacteriophage tail protein gpt | D5071_04605 | Not Available | Positive | 981315 - 983726 | 86315.7 |
| Tail terminator | D5071_04610 | Not Available | Positive | 983726 - 984655 | 33403.3 |
| Gp20, phage tail protein x | D5071_04615 | Not Available | Positive | 984645 - 984857 | 7932.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
