Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna,type:arg,anti_codon:cct; | Not Available | Not Available | Positive | 788513 - 788587 | Not Available |
| Hypothetical protein | D5071_03735 | Not Available | Negative | 788682 - 789596 | 33711.3 |
| Abc transporter | D5071_04530 | Not Available | Positive | 970434 - 972161 | 62508.7 |
| hlyd family type i secretion periplasmic adaptor subunit | D5071_04535 | Not Available | Positive | 972189 - 973517 | 49041.1 |
| peptidase | D5071_04540 | Not Available | Positive | 973520 - 974887 | 50950.9 |
| Gp51 | D5071_04545 | Not Available | Positive | 975127 - 975456 | 11970.2 |
| Endolysin | D5071_04550 | Not Available | Positive | 975458 - 976069 | 22953.4 |
| Hypothetical protein | D5071_04555 | Not Available | Positive | 976059 - 976733 | 24367.8 |
| Hypothetical protein | D5071_04560 | Not Available | Positive | 976723 - 977052 | 12854.6 |
| Hypothetical protein | D5071_04565 | Not Available | Positive | 977045 - 977356 | 11880.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
