Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa-binding protein | D5071_04810 | Not Available | Positive | 1025876 - 1026289 | 14829.2 |
| heat shock protein hspq | D5071_04815 | Not Available | Negative | 1026372 - 1026680 | 11790.9 |
| acylphosphatase | D5071_04820 | Not Available | Positive | 1026907 - 1027185 | 10144.0 |
| sulfurtransferase tuse | D5071_04825 | Not Available | Negative | 1027198 - 1027527 | 12312.0 |
| ftsh protease modulator ycca | D5071_04830 | Not Available | Negative | 1027637 - 1028296 | 23275.2 |
| hypothetical protein | D5071_04835 | Not Available | Positive | 1028449 - 1028523 | 2548.12 |
| Trna-ser | Not Available | Not Available | Positive | 1028577 - 1028664 | Not Available |
| dna-binding response regulator | D5071_04845 | Not Available | Negative | 1029173 - 1029427 | 9488.53 |
| nudix domain-containing protein | D5071_04850 | Not Available | Positive | 1029928 - 1030350 | 15783.8 |
| isochorismatase family protein | D5071_04855 | Not Available | Positive | 1030438 - 1030962 | 19138.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
