Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lon protease family protein | D5071_04760 | Not Available | Negative | 1014256 - 1016025 | 66125.9 |
| macrodomain ter protein matp | D5071_04765 | Not Available | Positive | 1016203 - 1016661 | 18075.9 |
| porin ompa | D5071_04770 | Not Available | Negative | 1016813 - 1017898 | 38299.3 |
| cell division inhibitor sula | D5071_04775 | Not Available | Negative | 1018261 - 1018767 | 18879.7 |
| tfox/sxy family dna transformation protein | D5071_04780 | Not Available | Positive | 1018991 - 1019611 | 23356.2 |
| tigr01666 family membrane protein | D5071_04785 | Not Available | Negative | 1019626 - 1021761 | 79908.2 |
| yccf domain-containing protein | D5071_04790 | Not Available | Negative | 1021782 - 1022228 | 16551.6 |
| dna helicase iv | D5071_04795 | Not Available | Positive | 1022426 - 1024483 | 78391.9 |
| methylglyoxal synthase | D5071_04800 | Not Available | Negative | 1024561 - 1025019 | 16905.5 |
| duf2057 family protein | D5071_04805 | Not Available | Negative | 1025157 - 1025681 | 18737.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
